Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shcbp1lQ3TTP0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Rprl3-201ENSMUST00000157400 290 ntBASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shcbp1lQ3TTP0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Gm12895-201ENSMUST00000122214 226 ntBASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shcbp1lQ3TTP0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm24589-201ENSMUST00000116692 94 ntBASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shcbp1lQ3TTP0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shcbp1lQ3TTP0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms