Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cul4aQ3TCH7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Gm7213-201ENSMUST00000215977 950 ntBASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.11■□□□□ 0.33
Cul4aQ3TCH7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.1■□□□□ 0.33
Cul4aQ3TCH7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.09■□□□□ 0.33
Cul4aQ3TCH7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms