Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim63Q38HM4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.5□□□□□ -0.25
Trim63Q38HM4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim63Q38HM4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Gm43566-201ENSMUST00000196851 808 ntBASIC13.49□□□□□ -0.25
Trim63Q38HM4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.49□□□□□ -0.25
Trim63Q38HM4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim63Q38HM4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim63Q38HM4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms