Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chrna5Q2MKA5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Gm14701-201ENSMUST00000117156 348 ntBASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna5Q2MKA5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm8825-201ENSMUST00000182565 998 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm4518-201ENSMUST00000182638 718 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna5Q2MKA5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna5Q2MKA5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Chrna5Q2MKA5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms