Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.61□□□□□ -0.39
Cdx4Q07424 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cdx4Q07424 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx4Q07424 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.6□□□□□ -0.39
Cdx4Q07424 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gm6345-202ENSMUST00000180900 204 ntBASIC12.6□□□□□ -0.39
Cdx4Q07424 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gm21559-201ENSMUST00000220638 855 ntBASIC12.6□□□□□ -0.39
Cdx4Q07424 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gm8587-201ENSMUST00000076538 843 ntBASIC12.6□□□□□ -0.39
Cdx4Q07424 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdx4Q07424 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx4Q07424 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.59□□□□□ -0.39
Cdx4Q07424 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdx4Q07424 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.59□□□□□ -0.39
Cdx4Q07424 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Cdx4Q07424 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx4Q07424 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx4Q07424 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx4Q07424 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cdx4Q07424 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Gm9013-201ENSMUST00000132939 882 ntBASIC12.58□□□□□ -0.4
Cdx4Q07424 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.58□□□□□ -0.4
Cdx4Q07424 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdx4Q07424 Gm7370-201ENSMUST00000219471 767 ntBASIC12.58□□□□□ -0.4
Cdx4Q07424 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.58□□□□□ -0.4
Cdx4Q07424 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.58□□□□□ -0.4
Cdx4Q07424 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdx4Q07424 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdx4Q07424 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms