Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-3P97334 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.45■□□□□ 0.86
Nkx2-3P97334 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.45■□□□□ 0.86
Nkx2-3P97334 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.45■□□□□ 0.86
Nkx2-3P97334 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-3P97334 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.44■□□□□ 0.86
Nkx2-3P97334 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Gm7222-201ENSMUST00000117512 906 ntBASIC20.44■□□□□ 0.86
Nkx2-3P97334 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.44■□□□□ 0.86
Nkx2-3P97334 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-3P97334 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm8825-201ENSMUST00000182565 998 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm4518-201ENSMUST00000182638 718 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.43■□□□□ 0.86
Nkx2-3P97334 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-3P97334 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.42■□□□□ 0.86
Nkx2-3P97334 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkx2-3P97334 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.41■□□□□ 0.86
Nkx2-3P97334 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nkx2-3P97334 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.41■□□□□ 0.86
Nkx2-3P97334 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-3P97334 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms