Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcr4P70658 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cxcr4P70658 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cxcr4P70658 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Gm22697-201ENSMUST00000175194 63 ntBASIC15.3■□□□□ 0.04
Cxcr4P70658 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cxcr4P70658 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cxcr4P70658 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.29■□□□□ 0.04
Cxcr4P70658 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.29■□□□□ 0.04
Cxcr4P70658 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Gm7370-201ENSMUST00000219471 767 ntBASIC15.29■□□□□ 0.04
Cxcr4P70658 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Cxcr4P70658 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.29■□□□□ 0.04
Cxcr4P70658 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.29■□□□□ 0.04
Cxcr4P70658 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cxcr4P70658 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cxcr4P70658 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cxcr4P70658 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Gm18958-201ENSMUST00000174258 762 ntBASIC15.28■□□□□ 0.04
Cxcr4P70658 Gm6659-201ENSMUST00000174752 547 ntBASIC15.28■□□□□ 0.04
Cxcr4P70658 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.28■□□□□ 0.04
Cxcr4P70658 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cxcr4P70658 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcr4P70658 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cxcr4P70658 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cxcr4P70658 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.27■□□□□ 0.04
Cxcr4P70658 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.04
Cxcr4P70658 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcr4P70658 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcr4P70658 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.27■□□□□ 0.04
Cxcr4P70658 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcr4P70658 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcr4P70658 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms