Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ufd1P70362 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ufd1P70362 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.04□□□□□ -0.16
Ufd1P70362 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Mir6349-201ENSMUST00000184059 97 ntBASIC14.04□□□□□ -0.16
Ufd1P70362 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.04□□□□□ -0.16
Ufd1P70362 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.04□□□□□ -0.16
Ufd1P70362 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ufd1P70362 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.03□□□□□ -0.16
Ufd1P70362 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ufd1P70362 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.03□□□□□ -0.16
Ufd1P70362 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.03□□□□□ -0.16
Ufd1P70362 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.03□□□□□ -0.16
Ufd1P70362 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ufd1P70362 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.03□□□□□ -0.16
Ufd1P70362 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ufd1P70362 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Sybu-209ENSMUST00000228639 4113 ntBASIC14.02□□□□□ -0.16
Ufd1P70362 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ufd1P70362 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Ufd1P70362 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ufd1P70362 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.02□□□□□ -0.16
Ufd1P70362 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.02□□□□□ -0.16
Ufd1P70362 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Gm11927-201ENSMUST00000118472 759 ntBASIC14.02□□□□□ -0.17
Ufd1P70362 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ufd1P70362 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Gm6365-201ENSMUST00000054711 744 ntBASIC14.02□□□□□ -0.17
Ufd1P70362 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ufd1P70362 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.02□□□□□ -0.17
Ufd1P70362 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ufd1P70362 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ufd1P70362 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Ufd1P70362 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ufd1P70362 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ufd1P70362 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ufd1P70362 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.01□□□□□ -0.17
Ufd1P70362 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ufd1P70362 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ufd1P70362 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.01□□□□□ -0.17
Ufd1P70362 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms