Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Pdlim4P70271 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pdlim4P70271 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.56□□□□□ -0.24
Pdlim4P70271 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pdlim4P70271 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
Pdlim4P70271 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim4P70271 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Gm5587-201ENSMUST00000206270 674 ntBASIC13.55□□□□□ -0.24
Pdlim4P70271 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pdlim4P70271 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim4P70271 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.54□□□□□ -0.24
Pdlim4P70271 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim4P70271 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim4P70271 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.53□□□□□ -0.24
Pdlim4P70271 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim4P70271 Gm29707-201ENSMUST00000196325 491 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms