Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ybx1P62960 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Ybx1P62960 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Ybx1P62960 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.65■□□□□ 0.26
Ybx1P62960 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.65■□□□□ 0.26
Ybx1P62960 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.65■□□□□ 0.26
Ybx1P62960 Gm7230-201ENSMUST00000173026 815 ntBASIC16.65■□□□□ 0.26
Ybx1P62960 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ybx1P62960 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.65■□□□□ 0.26
Ybx1P62960 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.65■□□□□ 0.26
Ybx1P62960 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ybx1P62960 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ybx1P62960 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.64■□□□□ 0.25
Ybx1P62960 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.64■□□□□ 0.25
Ybx1P62960 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.64■□□□□ 0.25
Ybx1P62960 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.64■□□□□ 0.25
Ybx1P62960 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.64■□□□□ 0.25
Ybx1P62960 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.64■□□□□ 0.25
Ybx1P62960 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Gm15590-201ENSMUST00000078419 552 ntBASIC16.64■□□□□ 0.25
Ybx1P62960 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ybx1P62960 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ybx1P62960 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.63■□□□□ 0.25
Ybx1P62960 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.63■□□□□ 0.25
Ybx1P62960 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.63■□□□□ 0.25
Ybx1P62960 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Gm5264-201ENSMUST00000190584 848 ntBASIC16.63■□□□□ 0.25
Ybx1P62960 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ybx1P62960 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ybx1P62960 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.62■□□□□ 0.25
Ybx1P62960 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Ybx1P62960 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.62■□□□□ 0.25
Ybx1P62960 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.62■□□□□ 0.25
Ybx1P62960 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.62■□□□□ 0.25
Ybx1P62960 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Psmb5-202ENSMUST00000227257 622 ntBASIC16.62■□□□□ 0.25
Ybx1P62960 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ybx1P62960 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ybx1P62960 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ybx1P62960 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.61■□□□□ 0.25
Ybx1P62960 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ybx1P62960 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms