Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks1bP61025 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cks1bP61025 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cks1bP61025 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Cks1bP61025 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Gm2399-201ENSMUST00000104944 225 ntBASIC11.65□□□□□ -0.54
Cks1bP61025 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.65□□□□□ -0.54
Cks1bP61025 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.65□□□□□ -0.54
Cks1bP61025 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.65□□□□□ -0.54
Cks1bP61025 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks1bP61025 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
Cks1bP61025 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.65□□□□□ -0.54
Cks1bP61025 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1bP61025 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1bP61025 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Cks1bP61025 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cks1bP61025 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.64□□□□□ -0.55
Cks1bP61025 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.64□□□□□ -0.55
Cks1bP61025 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm38285-201ENSMUST00000192928 922 ntBASIC11.64□□□□□ -0.55
Cks1bP61025 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.64□□□□□ -0.55
Cks1bP61025 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm6365-201ENSMUST00000054711 744 ntBASIC11.64□□□□□ -0.55
Cks1bP61025 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cks1bP61025 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.64□□□□□ -0.55
Cks1bP61025 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Cks1bP61025 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cks1bP61025 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cks1bP61025 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cks1bP61025 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Cks1bP61025 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.63□□□□□ -0.55
Cks1bP61025 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.63□□□□□ -0.55
Cks1bP61025 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cks1bP61025 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cks1bP61025 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cks1bP61025 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cks1bP61025 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cks1bP61025 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1bP61025 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cks1bP61025 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms