Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 Mir1668-201ENSMUST00000184114 107 ntBASIC11.97□□□□□ -0.49
CirbpP60824 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.97□□□□□ -0.49
CirbpP60824 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CirbpP60824 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CirbpP60824 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CirbpP60824 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
CirbpP60824 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.96□□□□□ -0.49
CirbpP60824 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CirbpP60824 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CirbpP60824 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CirbpP60824 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CirbpP60824 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
CirbpP60824 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CirbpP60824 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
CirbpP60824 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.95□□□□□ -0.5
CirbpP60824 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.95□□□□□ -0.5
CirbpP60824 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CirbpP60824 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.95□□□□□ -0.5
CirbpP60824 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Gm18101-201ENSMUST00000215769 548 ntBASIC11.95□□□□□ -0.5
CirbpP60824 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CirbpP60824 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CirbpP60824 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CirbpP60824 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CirbpP60824 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CirbpP60824 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.95□□□□□ -0.5
CirbpP60824 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
CirbpP60824 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CirbpP60824 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.94□□□□□ -0.5
CirbpP60824 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CirbpP60824 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.94□□□□□ -0.5
CirbpP60824 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.94□□□□□ -0.5
CirbpP60824 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CirbpP60824 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CirbpP60824 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms