Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rhbdl3P58873 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rhbdl3P58873 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Gm27646-201ENSMUST00000183989 110 ntBASIC19.24■□□□□ 0.67
Rhbdl3P58873 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Rhbdl3P58873 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Gm8000-201ENSMUST00000188378 592 ntBASIC19.23■□□□□ 0.67
Rhbdl3P58873 Gm37935-201ENSMUST00000192012 982 ntBASIC19.23■□□□□ 0.67
Rhbdl3P58873 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rhbdl3P58873 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.22■□□□□ 0.67
Rhbdl3P58873 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rhbdl3P58873 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm13216-201ENSMUST00000117145 591 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm7222-201ENSMUST00000117512 906 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm8825-201ENSMUST00000182565 998 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm4518-201ENSMUST00000182638 718 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.21■□□□□ 0.67
Rhbdl3P58873 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rhbdl3P58873 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.2■□□□□ 0.66
Rhbdl3P58873 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rhbdl3P58873 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.2■□□□□ 0.66
Rhbdl3P58873 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms