Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Gm38285-201ENSMUST00000192928 922 ntBASIC12.8□□□□□ -0.36
Ctdsp1P58466 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Cap2-205ENSMUST00000225824 1634 ntBASIC12.8□□□□□ -0.36
Ctdsp1P58466 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.8□□□□□ -0.36
Ctdsp1P58466 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Gm13146-201ENSMUST00000118508 780 ntBASIC12.79□□□□□ -0.36
Ctdsp1P58466 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.79□□□□□ -0.36
Ctdsp1P58466 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ctdsp1P58466 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.78□□□□□ -0.36
Ctdsp1P58466 Gm5812-201ENSMUST00000061073 957 ntBASIC12.78□□□□□ -0.36
Ctdsp1P58466 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ctdsp1P58466 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.77□□□□□ -0.36
Ctdsp1P58466 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms