Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NcanP55066 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NcanP55066 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NcanP55066 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
NcanP55066 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NcanP55066 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.12■□□□□ 0.33
NcanP55066 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.12■□□□□ 0.33
NcanP55066 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NcanP55066 Gm36967-201ENSMUST00000193814 266 ntBASIC17.12■□□□□ 0.33
NcanP55066 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NcanP55066 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NcanP55066 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NcanP55066 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NcanP55066 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NcanP55066 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.11■□□□□ 0.33
NcanP55066 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Gm45612-201ENSMUST00000211320 160 ntBASIC17.11■□□□□ 0.33
NcanP55066 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NcanP55066 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NcanP55066 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NcanP55066 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm4518-201ENSMUST00000182638 718 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.1■□□□□ 0.33
NcanP55066 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm43474-201ENSMUST00000196415 774 ntBASIC17.1■□□□□ 0.33
NcanP55066 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.1■□□□□ 0.33
NcanP55066 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NcanP55066 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.1■□□□□ 0.33
NcanP55066 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.1■□□□□ 0.33
NcanP55066 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NcanP55066 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NcanP55066 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NcanP55066 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NcanP55066 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.09■□□□□ 0.33
NcanP55066 Gm15427-201ENSMUST00000117288 531 ntBASIC17.09■□□□□ 0.33
NcanP55066 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.09■□□□□ 0.33
NcanP55066 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.09■□□□□ 0.33
NcanP55066 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.09■□□□□ 0.33
NcanP55066 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.09■□□□□ 0.33
NcanP55066 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.09■□□□□ 0.33
NcanP55066 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.09■□□□□ 0.33
NcanP55066 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NcanP55066 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.09■□□□□ 0.33
NcanP55066 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms