Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cacnb3P54285 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb3P54285 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb3P54285 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb3P54285 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb3P54285 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.95■□□□□ 0.62
Cacnb3P54285 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Gm27702-201ENSMUST00000184512 56 ntBASIC18.95■□□□□ 0.62
Cacnb3P54285 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cacnb3P54285 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacnb3P54285 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb3P54285 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cacnb3P54285 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.94■□□□□ 0.62
Cacnb3P54285 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.94■□□□□ 0.62
Cacnb3P54285 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.94■□□□□ 0.62
Cacnb3P54285 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.94■□□□□ 0.62
Cacnb3P54285 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.94■□□□□ 0.62
Cacnb3P54285 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb3P54285 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cacnb3P54285 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.93■□□□□ 0.62
Cacnb3P54285 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Gm14494-201ENSMUST00000118786 435 ntBASIC18.93■□□□□ 0.62
Cacnb3P54285 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cacnb3P54285 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.93■□□□□ 0.62
Cacnb3P54285 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.93■□□□□ 0.62
Cacnb3P54285 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.93■□□□□ 0.62
Cacnb3P54285 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb3P54285 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.92■□□□□ 0.62
Cacnb3P54285 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cacnb3P54285 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.92■□□□□ 0.62
Cacnb3P54285 Gm14140-201ENSMUST00000119999 995 ntBASIC18.92■□□□□ 0.62
Cacnb3P54285 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.92■□□□□ 0.62
Cacnb3P54285 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Gm9172-201ENSMUST00000212092 954 ntBASIC18.92■□□□□ 0.62
Cacnb3P54285 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.92■□□□□ 0.62
Cacnb3P54285 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.92■□□□□ 0.62
Cacnb3P54285 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb3P54285 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.92■□□□□ 0.62
Cacnb3P54285 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cacnb3P54285 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cacnb3P54285 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.91■□□□□ 0.62
Cacnb3P54285 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb3P54285 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cacnb3P54285 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb3P54285 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.91■□□□□ 0.62
Cacnb3P54285 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb3P54285 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb3P54285 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms