Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Atxn1P54254 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Atxn1P54254 Gm8097-201ENSMUST00000117903 829 ntBASIC16.15■□□□□ 0.18
Atxn1P54254 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.15■□□□□ 0.18
Atxn1P54254 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.15■□□□□ 0.18
Atxn1P54254 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.15■□□□□ 0.18
Atxn1P54254 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.15■□□□□ 0.18
Atxn1P54254 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Atxn1P54254 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Atxn1P54254 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Atxn1P54254 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atxn1P54254 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Atxn1P54254 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Atxn1P54254 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Atxn1P54254 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.14■□□□□ 0.17
Atxn1P54254 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.14■□□□□ 0.17
Atxn1P54254 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Atxn1P54254 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.14■□□□□ 0.17
Atxn1P54254 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Atxn1P54254 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atxn1P54254 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Atxn1P54254 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Atxn1P54254 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Atxn1P54254 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atxn1P54254 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Atxn1P54254 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Atxn1P54254 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Atxn1P54254 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.12■□□□□ 0.17
Atxn1P54254 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Atxn1P54254 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.12■□□□□ 0.17
Atxn1P54254 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Atxn1P54254 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Gm15590-201ENSMUST00000078419 552 ntBASIC16.12■□□□□ 0.17
Atxn1P54254 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Atxn1P54254 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Atxn1P54254 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Atxn1P54254 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Atxn1P54254 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atxn1P54254 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.11■□□□□ 0.17
Atxn1P54254 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atxn1P54254 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.11■□□□□ 0.17
Atxn1P54254 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atxn1P54254 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atxn1P54254 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Atxn1P54254 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Atxn1P54254 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Atxn1P54254 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Atxn1P54254 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Atxn1P54254 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms