Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lbx1P52955 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.71■□□□□ 0.11
Lbx1P52955 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Lbx1P52955 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.71■□□□□ 0.11
Lbx1P52955 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.71■□□□□ 0.11
Lbx1P52955 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Lbx1P52955 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Gm5682-201ENSMUST00000173402 505 ntBASIC15.71■□□□□ 0.11
Lbx1P52955 Gm43125-201ENSMUST00000201724 730 ntBASIC15.71■□□□□ 0.11
Lbx1P52955 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.71■□□□□ 0.11
Lbx1P52955 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lbx1P52955 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Lbx1P52955 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Lbx1P52955 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lbx1P52955 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lbx1P52955 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lbx1P52955 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.7■□□□□ 0.1
Lbx1P52955 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Lbx1P52955 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lbx1P52955 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.7■□□□□ 0.1
Lbx1P52955 Gm45612-201ENSMUST00000211320 160 ntBASIC15.7■□□□□ 0.1
Lbx1P52955 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.7■□□□□ 0.1
Lbx1P52955 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lbx1P52955 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Lbx1P52955 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lbx1P52955 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lbx1P52955 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Lbx1P52955 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.69■□□□□ 0.1
Lbx1P52955 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.69■□□□□ 0.1
Lbx1P52955 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.69■□□□□ 0.1
Lbx1P52955 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.69■□□□□ 0.1
Lbx1P52955 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.69■□□□□ 0.1
Lbx1P52955 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.69■□□□□ 0.1
Lbx1P52955 Mir7085-201ENSMUST00000184353 66 ntBASIC15.69■□□□□ 0.1
Lbx1P52955 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Lbx1P52955 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lbx1P52955 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.68■□□□□ 0.1
Lbx1P52955 Gm27618-201ENSMUST00000183671 60 ntBASIC15.68■□□□□ 0.1
Lbx1P52955 Gm27989-201ENSMUST00000184721 107 ntBASIC15.68■□□□□ 0.1
Lbx1P52955 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lbx1P52955 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lbx1P52955 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms