Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.16■□□□□ 0.5
Nek1P51954 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.16■□□□□ 0.5
Nek1P51954 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nek1P51954 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Nek1P51954 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nek1P51954 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nek1P51954 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.15■□□□□ 0.5
Nek1P51954 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Nek1P51954 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.15■□□□□ 0.5
Nek1P51954 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.15■□□□□ 0.5
Nek1P51954 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Gm7370-201ENSMUST00000219471 767 ntBASIC18.15■□□□□ 0.5
Nek1P51954 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nek1P51954 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nek1P51954 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nek1P51954 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nek1P51954 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nek1P51954 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.14■□□□□ 0.49
Nek1P51954 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.14■□□□□ 0.49
Nek1P51954 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.14■□□□□ 0.49
Nek1P51954 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nek1P51954 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nek1P51954 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nek1P51954 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nek1P51954 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nek1P51954 Gm7284-201ENSMUST00000131667 944 ntBASIC18.13■□□□□ 0.49
Nek1P51954 Ank2-226ENSMUST00000189368 339 ntBASIC18.13■□□□□ 0.49
Nek1P51954 Gm44450-201ENSMUST00000199528 114 ntBASIC18.13■□□□□ 0.49
Nek1P51954 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.13■□□□□ 0.49
Nek1P51954 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nek1P51954 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Nek1P51954 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nek1P51954 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nek1P51954 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Gm25016-201ENSMUST00000158399 131 ntBASIC18.12■□□□□ 0.49
Nek1P51954 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Gm18115-201ENSMUST00000221209 621 ntBASIC18.12■□□□□ 0.49
Nek1P51954 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nek1P51954 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nek1P51954 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nek1P51954 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nek1P51954 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nek1P51954 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms