Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.49■□□□□ 0.23
Lhx3P50481 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Gm15165-201ENSMUST00000118140 502 ntBASIC16.49■□□□□ 0.23
Lhx3P50481 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.49■□□□□ 0.23
Lhx3P50481 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.49■□□□□ 0.23
Lhx3P50481 Gm27867-201ENSMUST00000184778 125 ntBASIC16.49■□□□□ 0.23
Lhx3P50481 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.49■□□□□ 0.23
Lhx3P50481 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Lhx3P50481 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx3P50481 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
Lhx3P50481 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Lhx3P50481 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.48■□□□□ 0.23
Lhx3P50481 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.48■□□□□ 0.23
Lhx3P50481 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.48■□□□□ 0.23
Lhx3P50481 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lhx3P50481 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Lhx3P50481 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lhx3P50481 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lhx3P50481 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx3P50481 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lhx3P50481 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.47■□□□□ 0.23
Lhx3P50481 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.47■□□□□ 0.23
Lhx3P50481 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm34391-201ENSMUST00000203706 907 ntBASIC16.47■□□□□ 0.23
Lhx3P50481 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.47■□□□□ 0.23
Lhx3P50481 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lhx3P50481 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.47■□□□□ 0.23
Lhx3P50481 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx3P50481 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lhx3P50481 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lhx3P50481 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lhx3P50481 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lhx3P50481 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.46■□□□□ 0.23
Lhx3P50481 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Lhx3P50481 Mir6404-201ENSMUST00000183699 94 ntBASIC16.46■□□□□ 0.23
Lhx3P50481 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.46■□□□□ 0.23
Lhx3P50481 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lhx3P50481 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms