Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.18■□□□□ 0.18
Krt6aP50446 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.18■□□□□ 0.18
Krt6aP50446 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.18■□□□□ 0.18
Krt6aP50446 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Krt6aP50446 Gm27463-201ENSMUST00000183569 57 ntBASIC16.18■□□□□ 0.18
Krt6aP50446 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Krt6aP50446 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Krt6aP50446 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Gm18115-201ENSMUST00000221209 621 ntBASIC16.17■□□□□ 0.18
Krt6aP50446 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Krt6aP50446 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.17■□□□□ 0.18
Krt6aP50446 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Krt6aP50446 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.16■□□□□ 0.18
Krt6aP50446 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.16■□□□□ 0.18
Krt6aP50446 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.16■□□□□ 0.18
Krt6aP50446 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.16■□□□□ 0.18
Krt6aP50446 Gm21814-202ENSMUST00000203277 873 ntBASIC16.16■□□□□ 0.18
Krt6aP50446 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Krt6aP50446 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Krt6aP50446 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.16■□□□□ 0.18
Krt6aP50446 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.16■□□□□ 0.18
Krt6aP50446 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Krt6aP50446 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Krt6aP50446 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Krt6aP50446 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Krt6aP50446 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Krt6aP50446 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
Krt6aP50446 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.15■□□□□ 0.18
Krt6aP50446 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Krt6aP50446 Gm29257-201ENSMUST00000186115 639 ntBASIC16.15■□□□□ 0.18
Krt6aP50446 Gm8520-201ENSMUST00000186517 868 ntBASIC16.15■□□□□ 0.18
Krt6aP50446 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.15■□□□□ 0.18
Krt6aP50446 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.15■□□□□ 0.18
Krt6aP50446 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Krt6aP50446 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Krt6aP50446 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms