Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Mir5122-201ENSMUST00000175004 89 ntBASIC16.69■□□□□ 0.26
SftpbP50405 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.69■□□□□ 0.26
SftpbP50405 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.69■□□□□ 0.26
SftpbP50405 Gm21814-202ENSMUST00000203277 873 ntBASIC16.69■□□□□ 0.26
SftpbP50405 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Gm10812-201ENSMUST00000099864 546 ntBASIC16.69■□□□□ 0.26
SftpbP50405 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.69■□□□□ 0.26
SftpbP50405 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.69■□□□□ 0.26
SftpbP50405 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SftpbP50405 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.69■□□□□ 0.26
SftpbP50405 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SftpbP50405 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.68■□□□□ 0.26
SftpbP50405 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.68■□□□□ 0.26
SftpbP50405 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.68■□□□□ 0.26
SftpbP50405 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SftpbP50405 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SftpbP50405 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SftpbP50405 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.67■□□□□ 0.26
SftpbP50405 Gm13186-201ENSMUST00000118031 316 ntBASIC16.67■□□□□ 0.26
SftpbP50405 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Gm22240-201ENSMUST00000175225 82 ntBASIC16.67■□□□□ 0.26
SftpbP50405 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.67■□□□□ 0.26
SftpbP50405 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.67■□□□□ 0.26
SftpbP50405 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.67■□□□□ 0.26
SftpbP50405 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.67■□□□□ 0.26
SftpbP50405 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.67■□□□□ 0.26
SftpbP50405 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SftpbP50405 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.66■□□□□ 0.26
SftpbP50405 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SftpbP50405 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SftpbP50405 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SftpbP50405 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SftpbP50405 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.65■□□□□ 0.26
SftpbP50405 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.65■□□□□ 0.26
SftpbP50405 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SftpbP50405 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SftpbP50405 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms