Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LtbrP50284 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LtbrP50284 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.08■□□□□ 0.64
LtbrP50284 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.08■□□□□ 0.64
LtbrP50284 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.08■□□□□ 0.64
LtbrP50284 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.08■□□□□ 0.64
LtbrP50284 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LtbrP50284 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
LtbrP50284 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LtbrP50284 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LtbrP50284 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LtbrP50284 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
LtbrP50284 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LtbrP50284 Gm7506-201ENSMUST00000207758 815 ntBASIC19.07■□□□□ 0.64
LtbrP50284 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.07■□□□□ 0.64
LtbrP50284 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LtbrP50284 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.07■□□□□ 0.64
LtbrP50284 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.07■□□□□ 0.64
LtbrP50284 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LtbrP50284 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LtbrP50284 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LtbrP50284 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.06■□□□□ 0.64
LtbrP50284 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.06■□□□□ 0.64
LtbrP50284 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.06■□□□□ 0.64
LtbrP50284 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.06■□□□□ 0.64
LtbrP50284 Chchd1-203ENSMUST00000224633 557 ntBASIC19.06■□□□□ 0.64
LtbrP50284 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.06■□□□□ 0.64
LtbrP50284 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.06■□□□□ 0.64
LtbrP50284 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LtbrP50284 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.05■□□□□ 0.64
LtbrP50284 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LtbrP50284 Gm44430-201ENSMUST00000203376 995 ntBASIC19.05■□□□□ 0.64
LtbrP50284 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LtbrP50284 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.05■□□□□ 0.64
LtbrP50284 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LtbrP50284 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LtbrP50284 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LtbrP50284 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.04■□□□□ 0.64
LtbrP50284 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
LtbrP50284 Gm19891-201ENSMUST00000189771 303 ntBASIC19.04■□□□□ 0.64
LtbrP50284 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LtbrP50284 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.04■□□□□ 0.64
LtbrP50284 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.03■□□□□ 0.64
LtbrP50284 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.03■□□□□ 0.64
LtbrP50284 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.03■□□□□ 0.64
LtbrP50284 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.03■□□□□ 0.64
LtbrP50284 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.03■□□□□ 0.64
LtbrP50284 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.03■□□□□ 0.64
LtbrP50284 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LtbrP50284 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LtbrP50284 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LtbrP50284 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LtbrP50284 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.02■□□□□ 0.64
LtbrP50284 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.02■□□□□ 0.64
LtbrP50284 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms