Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hnf4aP49698 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hnf4aP49698 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.8■□□□□ 0.12
Hnf4aP49698 Gm27389-201ENSMUST00000183622 195 ntBASIC15.8■□□□□ 0.12
Hnf4aP49698 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hnf4aP49698 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Hnf4aP49698 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hnf4aP49698 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.8■□□□□ 0.12
Hnf4aP49698 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.79■□□□□ 0.12
Hnf4aP49698 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hnf4aP49698 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Hnf4aP49698 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hnf4aP49698 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hnf4aP49698 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Hnf4aP49698 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hnf4aP49698 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.78■□□□□ 0.12
Hnf4aP49698 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.78■□□□□ 0.12
Hnf4aP49698 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hnf4aP49698 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hnf4aP49698 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.77■□□□□ 0.12
Hnf4aP49698 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Hnf4aP49698 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Gm18101-201ENSMUST00000215769 548 ntBASIC15.77■□□□□ 0.12
Hnf4aP49698 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hnf4aP49698 Gm9987-201ENSMUST00000069768 567 ntBASIC15.77■□□□□ 0.12
Hnf4aP49698 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Hnf4aP49698 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hnf4aP49698 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hnf4aP49698 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hnf4aP49698 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Hnf4aP49698 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Hnf4aP49698 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hnf4aP49698 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Hnf4aP49698 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hnf4aP49698 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms