Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Abca1P41233 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Abca1P41233 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Abca1P41233 Gm1401-201ENSMUST00000122048 772 ntBASIC13.5□□□□□ -0.25
Abca1P41233 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.5□□□□□ -0.25
Abca1P41233 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Abca1P41233 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Abca1P41233 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Abca1P41233 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.49□□□□□ -0.25
Abca1P41233 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.49□□□□□ -0.25
Abca1P41233 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Abca1P41233 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Abca1P41233 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Abca1P41233 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Gm12350-201ENSMUST00000121208 462 ntBASIC13.48□□□□□ -0.25
Abca1P41233 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.48□□□□□ -0.25
Abca1P41233 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.48□□□□□ -0.25
Abca1P41233 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.48□□□□□ -0.25
Abca1P41233 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.48□□□□□ -0.25
Abca1P41233 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.48□□□□□ -0.25
Abca1P41233 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms