Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.75■□□□□ 0.27
Cxcl12P40224 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.75■□□□□ 0.27
Cxcl12P40224 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.75■□□□□ 0.27
Cxcl12P40224 Gm37153-201ENSMUST00000193637 231 ntBASIC16.75■□□□□ 0.27
Cxcl12P40224 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cxcl12P40224 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.74■□□□□ 0.27
Cxcl12P40224 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.74■□□□□ 0.27
Cxcl12P40224 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.74■□□□□ 0.27
Cxcl12P40224 Gm20949-201ENSMUST00000206478 952 ntBASIC16.74■□□□□ 0.27
Cxcl12P40224 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.74■□□□□ 0.27
Cxcl12P40224 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cxcl12P40224 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cxcl12P40224 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm4899-201ENSMUST00000178708 719 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm8825-201ENSMUST00000182565 998 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm4518-201ENSMUST00000182638 718 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.73■□□□□ 0.27
Cxcl12P40224 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cxcl12P40224 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cxcl12P40224 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cxcl12P40224 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cxcl12P40224 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.72■□□□□ 0.27
Cxcl12P40224 Gm36967-201ENSMUST00000193814 266 ntBASIC16.72■□□□□ 0.27
Cxcl12P40224 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cxcl12P40224 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cxcl12P40224 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cxcl12P40224 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms