Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh4P39038 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh4P39038 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh4P39038 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.58■□□□□ 0.09
Cdh4P39038 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdh4P39038 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Cdh4P39038 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdh4P39038 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdh4P39038 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cdh4P39038 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.58■□□□□ 0.08
Cdh4P39038 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdh4P39038 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdh4P39038 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.58■□□□□ 0.08
Cdh4P39038 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdh4P39038 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdh4P39038 Gm13216-201ENSMUST00000117145 591 ntBASIC15.57■□□□□ 0.08
Cdh4P39038 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Gm10052-201ENSMUST00000168019 960 ntBASIC15.57■□□□□ 0.08
Cdh4P39038 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Gm7729-201ENSMUST00000050143 801 ntBASIC15.57■□□□□ 0.08
Cdh4P39038 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cdh4P39038 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cdh4P39038 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdh4P39038 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdh4P39038 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh4P39038 Gm27742-201ENSMUST00000184667 60 ntBASIC15.56■□□□□ 0.08
Cdh4P39038 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cdh4P39038 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdh4P39038 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.56■□□□□ 0.08
Cdh4P39038 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.56■□□□□ 0.08
Cdh4P39038 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdh4P39038 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdh4P39038 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdh4P39038 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdh4P39038 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdh4P39038 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdh4P39038 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh4P39038 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.54■□□□□ 0.08
Cdh4P39038 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms