Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Foxa1P35582 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.07■□□□□ 0
Foxa1P35582 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.07■□□□□ 0
Foxa1P35582 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.07■□□□□ 0
Foxa1P35582 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.07■□□□□ 0
Foxa1P35582 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Foxa1P35582 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.06■□□□□ 0
Foxa1P35582 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.06■□□□□ 0
Foxa1P35582 Gm33142-201ENSMUST00000193913 867 ntBASIC15.06■□□□□ 0
Foxa1P35582 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Foxa1P35582 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Foxa1P35582 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.05■□□□□ 0
Foxa1P35582 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Foxa1P35582 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Foxa1P35582 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.05■□□□□ 0
Foxa1P35582 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Foxa1P35582 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.05■□□□□ -0
Foxa1P35582 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.05■□□□□ -0
Foxa1P35582 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.05■□□□□ -0
Foxa1P35582 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.05■□□□□ -0
Foxa1P35582 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.05■□□□□ -0
Foxa1P35582 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.05■□□□□ -0
Foxa1P35582 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.05■□□□□ -0
Foxa1P35582 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Foxa1P35582 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Foxa1P35582 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Foxa1P35582 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.04■□□□□ -0
Foxa1P35582 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.04■□□□□ -0
Foxa1P35582 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.04■□□□□ -0
Foxa1P35582 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.04■□□□□ -0
Foxa1P35582 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Foxa1P35582 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Foxa1P35582 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Foxa1P35582 Gm44430-201ENSMUST00000203376 995 ntBASIC15.04■□□□□ -0
Foxa1P35582 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Foxa1P35582 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.04■□□□□ -0
Foxa1P35582 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.04■□□□□ -0
Foxa1P35582 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Foxa1P35582 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Foxa1P35582 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms