Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.15■□□□□ 0.02
Nedd8P29595 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Nedd8P29595 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.15■□□□□ 0.02
Nedd8P29595 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Nedd8P29595 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.15■□□□□ 0.02
Nedd8P29595 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nedd8P29595 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.14■□□□□ 0.01
Nedd8P29595 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.14■□□□□ 0.01
Nedd8P29595 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
Nedd8P29595 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.14■□□□□ 0.01
Nedd8P29595 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nedd8P29595 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Nedd8P29595 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Nedd8P29595 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nedd8P29595 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nedd8P29595 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nedd8P29595 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nedd8P29595 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nedd8P29595 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nedd8P29595 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Nedd8P29595 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nedd8P29595 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nedd8P29595 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nedd8P29595 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.12■□□□□ 0.01
Nedd8P29595 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nedd8P29595 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nedd8P29595 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.11■□□□□ 0.01
Nedd8P29595 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.11■□□□□ 0.01
Nedd8P29595 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.11■□□□□ 0.01
Nedd8P29595 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nedd8P29595 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms