Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pde6aP27664 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.88■□□□□ 0.61
Pde6aP27664 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pde6aP27664 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pde6aP27664 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.88■□□□□ 0.61
Pde6aP27664 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pde6aP27664 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.88■□□□□ 0.61
Pde6aP27664 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.88■□□□□ 0.61
Pde6aP27664 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pde6aP27664 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pde6aP27664 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.87■□□□□ 0.61
Pde6aP27664 Gm13312-201ENSMUST00000119631 718 ntBASIC18.87■□□□□ 0.61
Pde6aP27664 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.87■□□□□ 0.61
Pde6aP27664 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.87■□□□□ 0.61
Pde6aP27664 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Mir3081-201ENSMUST00000175305 84 ntBASIC18.87■□□□□ 0.61
Pde6aP27664 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.87■□□□□ 0.61
Pde6aP27664 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.87■□□□□ 0.61
Pde6aP27664 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pde6aP27664 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.87■□□□□ 0.61
Pde6aP27664 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pde6aP27664 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.86■□□□□ 0.61
Pde6aP27664 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pde6aP27664 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.86■□□□□ 0.61
Pde6aP27664 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.86■□□□□ 0.61
Pde6aP27664 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pde6aP27664 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pde6aP27664 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Pde6aP27664 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.85■□□□□ 0.61
Pde6aP27664 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.85■□□□□ 0.61
Pde6aP27664 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Gm17807-201ENSMUST00000186869 298 ntBASIC18.85■□□□□ 0.61
Pde6aP27664 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Pde6aP27664 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Pde6aP27664 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6aP27664 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Pde6aP27664 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.84■□□□□ 0.61
Pde6aP27664 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6aP27664 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms