Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40lgP27548 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40lgP27548 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40lgP27548 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cd40lgP27548 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.02■□□□□ -0
Cd40lgP27548 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Cd40lgP27548 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Gm14859-201ENSMUST00000117752 357 ntBASIC15.02■□□□□ -0
Cd40lgP27548 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cd40lgP27548 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.02□□□□□ -0.01
Cd40lgP27548 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.02□□□□□ -0.01
Cd40lgP27548 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.02□□□□□ -0.01
Cd40lgP27548 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40lgP27548 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd40lgP27548 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.01□□□□□ -0.01
Cd40lgP27548 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.01□□□□□ -0.01
Cd40lgP27548 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm10566-201ENSMUST00000086739 996 ntBASIC15.01□□□□□ -0.01
Cd40lgP27548 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd40lgP27548 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.01□□□□□ -0.01
Cd40lgP27548 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cd40lgP27548 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40lgP27548 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40lgP27548 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Gm11336-201ENSMUST00000118168 334 ntBASIC15□□□□□ -0.01
Cd40lgP27548 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Cd40lgP27548 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40lgP27548 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Gm7367-201ENSMUST00000057611 492 ntBASIC15□□□□□ -0.01
Cd40lgP27548 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40lgP27548 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Gm43598-201ENSMUST00000202482 2479 ntBASIC15□□□□□ -0.01
Cd40lgP27548 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40lgP27548 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cd40lgP27548 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Gm6623-201ENSMUST00000173570 544 ntBASIC14.99□□□□□ -0.01
Cd40lgP27548 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.99□□□□□ -0.01
Cd40lgP27548 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Gm18115-201ENSMUST00000221209 621 ntBASIC14.99□□□□□ -0.01
Cd40lgP27548 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cd40lgP27548 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cd40lgP27548 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.99□□□□□ -0.01
Cd40lgP27548 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40lgP27548 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cd40lgP27548 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms