Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Nfkb1P25799 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.71■□□□□ 0.27
Nfkb1P25799 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.71■□□□□ 0.27
Nfkb1P25799 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nfkb1P25799 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nfkb1P25799 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.7■□□□□ 0.26
Nfkb1P25799 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Nfkb1P25799 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.7■□□□□ 0.26
Nfkb1P25799 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.7■□□□□ 0.26
Nfkb1P25799 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.7■□□□□ 0.26
Nfkb1P25799 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Nfkb1P25799 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nfkb1P25799 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.69■□□□□ 0.26
Nfkb1P25799 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nfkb1P25799 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.69■□□□□ 0.26
Nfkb1P25799 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.69■□□□□ 0.26
Nfkb1P25799 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nfkb1P25799 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.68■□□□□ 0.26
Nfkb1P25799 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nfkb1P25799 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.68■□□□□ 0.26
Nfkb1P25799 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nfkb1P25799 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.67■□□□□ 0.26
Nfkb1P25799 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.67■□□□□ 0.26
Nfkb1P25799 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.67■□□□□ 0.26
Nfkb1P25799 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.67■□□□□ 0.26
Nfkb1P25799 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.67■□□□□ 0.26
Nfkb1P25799 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nfkb1P25799 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nfkb1P25799 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms