Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.45■□□□□ 0.38
Aldh1a1P24549 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Aldh1a1P24549 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Aldh1a1P24549 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Gm36967-201ENSMUST00000193814 266 ntBASIC17.43■□□□□ 0.38
Aldh1a1P24549 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.43■□□□□ 0.38
Aldh1a1P24549 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Chchd1-203ENSMUST00000224633 557 ntBASIC17.43■□□□□ 0.38
Aldh1a1P24549 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.43■□□□□ 0.38
Aldh1a1P24549 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Aldh1a1P24549 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Aldh1a1P24549 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Gm14057-201ENSMUST00000120631 482 ntBASIC17.42■□□□□ 0.38
Aldh1a1P24549 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.42■□□□□ 0.38
Aldh1a1P24549 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Aldh1a1P24549 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Aldh1a1P24549 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.42■□□□□ 0.38
Aldh1a1P24549 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.41■□□□□ 0.38
Aldh1a1P24549 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.41■□□□□ 0.38
Aldh1a1P24549 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Aldh1a1P24549 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms