Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm7791-201ENSMUST00000219066 539 ntBASIC14.94□□□□□ -0.02
Hmgn1P18608 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgn1P18608 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.93□□□□□ -0.02
Hmgn1P18608 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgn1P18608 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgn1P18608 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.92□□□□□ -0.02
Hmgn1P18608 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hmgn1P18608 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgn1P18608 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.91□□□□□ -0.02
Hmgn1P18608 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Gm13186-201ENSMUST00000118031 316 ntBASIC14.91□□□□□ -0.02
Hmgn1P18608 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.91□□□□□ -0.02
Hmgn1P18608 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hmgn1P18608 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hmgn1P18608 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.9□□□□□ -0.02
Hmgn1P18608 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgn1P18608 Gm10698-201ENSMUST00000182663 604 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms