Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.64■□□□□ 0.25
Rb1P13405 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rb1P13405 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rb1P13405 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Rb1P13405 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rb1P13405 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rb1P13405 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Rb1P13405 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.62■□□□□ 0.25
Rb1P13405 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.62■□□□□ 0.25
Rb1P13405 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Rb1P13405 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rb1P13405 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Idnk-204ENSMUST00000226010 1898 ntBASIC16.62■□□□□ 0.25
Rb1P13405 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rb1P13405 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rb1P13405 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rb1P13405 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.61■□□□□ 0.25
Rb1P13405 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.61■□□□□ 0.25
Rb1P13405 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.61■□□□□ 0.25
Rb1P13405 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Gm15794-201ENSMUST00000120182 631 ntBASIC16.61■□□□□ 0.25
Rb1P13405 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.61■□□□□ 0.25
Rb1P13405 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Mir8112-201ENSMUST00000184382 131 ntBASIC16.61■□□□□ 0.25
Rb1P13405 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rb1P13405 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rb1P13405 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rb1P13405 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rb1P13405 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rb1P13405 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rb1P13405 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Rb1P13405 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.6■□□□□ 0.25
Rb1P13405 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rb1P13405 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rb1P13405 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.59■□□□□ 0.25
Rb1P13405 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rb1P13405 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rb1P13405 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms