Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccl1P10146 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccl1P10146 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl1P10146 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.7□□□□□ -0.38
Ccl1P10146 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.7□□□□□ -0.38
Ccl1P10146 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.7□□□□□ -0.38
Ccl1P10146 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccl1P10146 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl1P10146 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccl1P10146 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl1P10146 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl1P10146 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.69□□□□□ -0.38
Ccl1P10146 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl1P10146 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccl1P10146 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccl1P10146 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccl1P10146 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Gm10493-201ENSMUST00000097270 612 ntBASIC12.69□□□□□ -0.38
Ccl1P10146 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccl1P10146 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccl1P10146 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl1P10146 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl1P10146 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccl1P10146 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl1P10146 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ccl1P10146 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccl1P10146 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.68□□□□□ -0.38
Ccl1P10146 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccl1P10146 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.68□□□□□ -0.38
Ccl1P10146 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccl1P10146 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccl1P10146 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms