Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.28□□□□□ -0.6
Smim1P0C8K7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim1P0C8K7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.27□□□□□ -0.6
Smim1P0C8K7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Sybu-209ENSMUST00000228639 4113 ntBASIC11.27□□□□□ -0.61
Smim1P0C8K7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim1P0C8K7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Smim1P0C8K7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim1P0C8K7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms