Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PtcraP0C6B2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Gm6345-202ENSMUST00000180900 204 ntBASIC14.15□□□□□ -0.14
PtcraP0C6B2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Gm17808-201ENSMUST00000200859 894 ntBASIC14.15□□□□□ -0.14
PtcraP0C6B2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PtcraP0C6B2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.14□□□□□ -0.15
PtcraP0C6B2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.14□□□□□ -0.15
PtcraP0C6B2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PtcraP0C6B2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.13□□□□□ -0.15
PtcraP0C6B2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms