Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.32■□□□□ 0.36
Hoxc8P09025 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.31■□□□□ 0.36
Hoxc8P09025 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
Hoxc8P09025 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.31■□□□□ 0.36
Hoxc8P09025 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
Hoxc8P09025 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.31■□□□□ 0.36
Hoxc8P09025 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hoxc8P09025 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxc8P09025 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxc8P09025 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Hoxc8P09025 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.3■□□□□ 0.36
Hoxc8P09025 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxc8P09025 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hoxc8P09025 Gm24513-201ENSMUST00000174964 138 ntBASIC17.3■□□□□ 0.36
Hoxc8P09025 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc8P09025 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxc8P09025 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxc8P09025 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Gm8344-201ENSMUST00000119813 856 ntBASIC17.29■□□□□ 0.36
Hoxc8P09025 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Mir8117-201ENSMUST00000184773 107 ntBASIC17.29■□□□□ 0.36
Hoxc8P09025 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.29■□□□□ 0.36
Hoxc8P09025 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.29■□□□□ 0.36
Hoxc8P09025 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc8P09025 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc8P09025 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Hoxc8P09025 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hoxc8P09025 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxc8P09025 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.28■□□□□ 0.36
Hoxc8P09025 Gm37153-201ENSMUST00000193637 231 ntBASIC17.28■□□□□ 0.36
Hoxc8P09025 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxc8P09025 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Hoxc8P09025 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc8P09025 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc8P09025 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms