Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PdgfrbP05622 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PdgfrbP05622 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PdgfrbP05622 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.47■□□□□ 0.23
PdgfrbP05622 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PdgfrbP05622 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
PdgfrbP05622 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.46■□□□□ 0.23
PdgfrbP05622 Gm6659-201ENSMUST00000174752 547 ntBASIC16.46■□□□□ 0.23
PdgfrbP05622 Gm23634-201ENSMUST00000175071 91 ntBASIC16.46■□□□□ 0.23
PdgfrbP05622 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PdgfrbP05622 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PdgfrbP05622 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PdgfrbP05622 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PdgfrbP05622 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PdgfrbP05622 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PdgfrbP05622 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PdgfrbP05622 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.45■□□□□ 0.22
PdgfrbP05622 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.45■□□□□ 0.22
PdgfrbP05622 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Gm9013-201ENSMUST00000132939 882 ntBASIC16.45■□□□□ 0.22
PdgfrbP05622 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Gm6345-202ENSMUST00000180900 204 ntBASIC16.45■□□□□ 0.22
PdgfrbP05622 Gm5587-201ENSMUST00000206270 674 ntBASIC16.45■□□□□ 0.22
PdgfrbP05622 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PdgfrbP05622 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PdgfrbP05622 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.45■□□□□ 0.22
PdgfrbP05622 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
PdgfrbP05622 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PdgfrbP05622 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PdgfrbP05622 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Gm6623-201ENSMUST00000173570 544 ntBASIC16.44■□□□□ 0.22
PdgfrbP05622 Gm36967-201ENSMUST00000193814 266 ntBASIC16.44■□□□□ 0.22
PdgfrbP05622 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PdgfrbP05622 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PdgfrbP05622 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PdgfrbP05622 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PdgfrbP05622 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms