Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P04940 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.22□□□□□ -0.29
P04940 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.22□□□□□ -0.29
P04940 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P04940 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.22□□□□□ -0.29
P04940 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.22□□□□□ -0.29
P04940 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04940 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.21□□□□□ -0.29
P04940 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
P04940 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P04940 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.21□□□□□ -0.29
P04940 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04940 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.21□□□□□ -0.3
P04940 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04940 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.2□□□□□ -0.3
P04940 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
P04940 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.2□□□□□ -0.3
P04940 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
P04940 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
P04940 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Gm25016-201ENSMUST00000158399 131 ntBASIC13.2□□□□□ -0.3
P04940 Gm6623-201ENSMUST00000173570 544 ntBASIC13.2□□□□□ -0.3
P04940 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
P04940 Mir7071-201ENSMUST00000184847 69 ntBASIC13.2□□□□□ -0.3
P04940 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.2□□□□□ -0.3
P04940 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.2□□□□□ -0.3
P04940 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.2□□□□□ -0.3
P04940 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P04940 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.2□□□□□ -0.3
P04940 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.2□□□□□ -0.3
P04940 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
P04940 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04940 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04940 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P04940 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04940 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.19□□□□□ -0.3
P04940 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04940 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04940 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms