Protein–RNA interactions for Protein: P02830

Hoxa7, Homeobox protein Hox-A7, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa7P02830 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxa7P02830 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.7■□□□□ 0.74
Hoxa7P02830 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxa7P02830 Gm6659-201ENSMUST00000174752 547 ntBASIC19.7■□□□□ 0.74
Hoxa7P02830 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxa7P02830 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxa7P02830 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxa7P02830 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxa7P02830 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxa7P02830 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxa7P02830 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxa7P02830 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Hoxa7P02830 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Hoxa7P02830 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hoxa7P02830 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.67■□□□□ 0.74
Hoxa7P02830 Gm13312-201ENSMUST00000119631 718 ntBASIC19.67■□□□□ 0.74
Hoxa7P02830 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxa7P02830 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.67■□□□□ 0.74
Hoxa7P02830 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.67■□□□□ 0.74
Hoxa7P02830 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxa7P02830 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Hoxa7P02830 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.66■□□□□ 0.74
Hoxa7P02830 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxa7P02830 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxa7P02830 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxa7P02830 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxa7P02830 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms