Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Golgb1-201ENSMUST00000023534 498 ntBASIC11.54□□□□□ -0.56
Hbb-b1P02088 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hbb-b1P02088 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Gm13401-201ENSMUST00000117074 291 ntBASIC11.53□□□□□ -0.56
Hbb-b1P02088 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hbb-b1P02088 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hbb-b1P02088 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.52□□□□□ -0.56
Hbb-b1P02088 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.52□□□□□ -0.56
Hbb-b1P02088 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hbb-b1P02088 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hbb-b1P02088 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hbb-b1P02088 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.52□□□□□ -0.57
Hbb-b1P02088 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.52□□□□□ -0.57
Hbb-b1P02088 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.52□□□□□ -0.57
Hbb-b1P02088 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Gm15546-201ENSMUST00000122095 826 ntBASIC11.52□□□□□ -0.57
Hbb-b1P02088 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hbb-b1P02088 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Hbb-b1P02088 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.52□□□□□ -0.57
Hbb-b1P02088 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-b1P02088 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-b1P02088 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms