Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Gm44450-201ENSMUST00000199528 114 ntBASIC17.53■□□□□ 0.4
Vti1aO89116 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.53■□□□□ 0.4
Vti1aO89116 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Vti1aO89116 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vti1aO89116 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.53■□□□□ 0.4
Vti1aO89116 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Vti1aO89116 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vti1aO89116 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vti1aO89116 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.52■□□□□ 0.4
Vti1aO89116 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Vti1aO89116 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Gm18195-201ENSMUST00000207604 706 ntBASIC17.52■□□□□ 0.4
Vti1aO89116 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vti1aO89116 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vti1aO89116 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Vti1aO89116 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vti1aO89116 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vti1aO89116 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vti1aO89116 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vti1aO89116 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.51■□□□□ 0.39
Vti1aO89116 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.51■□□□□ 0.39
Vti1aO89116 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.51■□□□□ 0.39
Vti1aO89116 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vti1aO89116 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.51■□□□□ 0.39
Vti1aO89116 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vti1aO89116 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vti1aO89116 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Vti1aO89116 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Vti1aO89116 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.5■□□□□ 0.39
Vti1aO89116 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Vti1aO89116 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vti1aO89116 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.49■□□□□ 0.39
Vti1aO89116 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.49■□□□□ 0.39
Vti1aO89116 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vti1aO89116 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.49■□□□□ 0.39
Vti1aO89116 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.49■□□□□ 0.39
Vti1aO89116 Gm15372-201ENSMUST00000120729 834 ntBASIC17.49■□□□□ 0.39
Vti1aO89116 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.49■□□□□ 0.39
Vti1aO89116 Rprl3-201ENSMUST00000157400 290 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms