Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.73■□□□□ 0.27
Syn1O88935 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.73■□□□□ 0.27
Syn1O88935 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Syn1O88935 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Syn1O88935 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Syn1O88935 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Syn1O88935 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Syn1O88935 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.72■□□□□ 0.27
Syn1O88935 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.72■□□□□ 0.27
Syn1O88935 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.72■□□□□ 0.27
Syn1O88935 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.72■□□□□ 0.27
Syn1O88935 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.72■□□□□ 0.27
Syn1O88935 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Syn1O88935 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Syn1O88935 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Syn1O88935 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.71■□□□□ 0.27
Syn1O88935 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.71■□□□□ 0.27
Syn1O88935 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.71■□□□□ 0.27
Syn1O88935 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.71■□□□□ 0.27
Syn1O88935 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Syn1O88935 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Syn1O88935 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.71■□□□□ 0.27
Syn1O88935 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Syn1O88935 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Syn1O88935 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Syn1O88935 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Syn1O88935 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.7■□□□□ 0.26
Syn1O88935 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.7■□□□□ 0.26
Syn1O88935 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Syn1O88935 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.7■□□□□ 0.26
Syn1O88935 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.7■□□□□ 0.26
Syn1O88935 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Syn1O88935 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Syn1O88935 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Syn1O88935 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.69■□□□□ 0.26
Syn1O88935 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.69■□□□□ 0.26
Syn1O88935 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.69■□□□□ 0.26
Syn1O88935 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Syn1O88935 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.69■□□□□ 0.26
Syn1O88935 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Syn1O88935 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.69■□□□□ 0.26
Syn1O88935 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
Syn1O88935 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms