Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.58□□□□□ -0.08
Hdac3O88895 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.58□□□□□ -0.08
Hdac3O88895 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.58□□□□□ -0.08
Hdac3O88895 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.58□□□□□ -0.08
Hdac3O88895 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hdac3O88895 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hdac3O88895 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Hdac3O88895 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hdac3O88895 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Hdac3O88895 Gm11539-201ENSMUST00000119837 557 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Gm13436-201ENSMUST00000120418 567 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.57□□□□□ -0.08
Hdac3O88895 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hdac3O88895 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Hdac3O88895 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.57□□□□□ -0.08
Hdac3O88895 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.57□□□□□ -0.08
Hdac3O88895 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hdac3O88895 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hdac3O88895 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Hdac3O88895 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hdac3O88895 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Hdac3O88895 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hdac3O88895 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hdac3O88895 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Hdac3O88895 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.56□□□□□ -0.08
Hdac3O88895 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hdac3O88895 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.55□□□□□ -0.08
Hdac3O88895 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hdac3O88895 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Hdac3O88895 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hdac3O88895 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Hdac3O88895 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms