Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm27741-201ENSMUST00000185060 237 ntBASIC21.16■□□□□ 0.98
Apaf1O88879 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.16■□□□□ 0.98
Apaf1O88879 Gm44454-201ENSMUST00000198541 138 ntBASIC21.16■□□□□ 0.98
Apaf1O88879 Birc2-201ENSMUST00000054878 378 ntBASIC21.16■□□□□ 0.98
Apaf1O88879 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Apaf1O88879 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Apaf1O88879 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apaf1O88879 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Apaf1O88879 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apaf1O88879 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Apaf1O88879 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Apaf1O88879 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Apaf1O88879 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.14■□□□□ 0.98
Apaf1O88879 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Apaf1O88879 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Apaf1O88879 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Apaf1O88879 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Apaf1O88879 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.14■□□□□ 0.97
Apaf1O88879 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.14■□□□□ 0.97
Apaf1O88879 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC21.14■□□□□ 0.97
Apaf1O88879 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.14■□□□□ 0.97
Apaf1O88879 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.14■□□□□ 0.97
Apaf1O88879 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.14■□□□□ 0.97
Apaf1O88879 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Apaf1O88879 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Apaf1O88879 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.13■□□□□ 0.97
Apaf1O88879 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.13■□□□□ 0.97
Apaf1O88879 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.13■□□□□ 0.97
Apaf1O88879 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Apaf1O88879 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apaf1O88879 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.12■□□□□ 0.97
Apaf1O88879 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Apaf1O88879 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.12■□□□□ 0.97
Apaf1O88879 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apaf1O88879 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Apaf1O88879 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Apaf1O88879 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.11■□□□□ 0.97
Apaf1O88879 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Apaf1O88879 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.11■□□□□ 0.97
Apaf1O88879 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.11■□□□□ 0.97
Apaf1O88879 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Apaf1O88879 Gm15165-201ENSMUST00000118140 502 ntBASIC21.11■□□□□ 0.97
Apaf1O88879 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Apaf1O88879 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms