Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.71■□□□□ 0.43
Slc6a20bO88575 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm27300-201ENSMUST00000184085 97 ntBASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm27335-201ENSMUST00000184758 97 ntBASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gm45167-201ENSMUST00000208007 322 ntBASIC17.71■□□□□ 0.43
Slc6a20bO88575 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc6a20bO88575 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.7■□□□□ 0.42
Slc6a20bO88575 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.7■□□□□ 0.42
Slc6a20bO88575 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.7■□□□□ 0.42
Slc6a20bO88575 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc6a20bO88575 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc6a20bO88575 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc6a20bO88575 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Gm36967-201ENSMUST00000193814 266 ntBASIC17.68■□□□□ 0.42
Slc6a20bO88575 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc6a20bO88575 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Gm4899-201ENSMUST00000178708 719 ntBASIC17.67■□□□□ 0.42
Slc6a20bO88575 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.67■□□□□ 0.42
Slc6a20bO88575 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.67■□□□□ 0.42
Slc6a20bO88575 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a20bO88575 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms