Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf17O88472 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf17O88472 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf17O88472 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm11424-201ENSMUST00000121929 829 ntBASIC15.08■□□□□ 0
Tnfrsf17O88472 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm27300-201ENSMUST00000184085 97 ntBASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm27335-201ENSMUST00000184758 97 ntBASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm44492-201ENSMUST00000197012 141 ntBASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf17O88472 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tnfrsf17O88472 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Tnfrsf17O88472 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.08■□□□□ 0
Tnfrsf17O88472 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf17O88472 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.07■□□□□ 0
Tnfrsf17O88472 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.07■□□□□ 0
Tnfrsf17O88472 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf17O88472 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf17O88472 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.06■□□□□ 0
Tnfrsf17O88472 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf17O88472 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.06■□□□□ 0
Tnfrsf17O88472 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tnfrsf17O88472 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Gm23547-201ENSMUST00000158210 271 ntBASIC15.06■□□□□ 0
Tnfrsf17O88472 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf17O88472 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.06■□□□□ 0
Tnfrsf17O88472 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf17O88472 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms