Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.23■□□□□ 0.03
Tulp3O88413 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Trmt13-210ENSMUST00000198454 880 ntBASIC15.23■□□□□ 0.03
Tulp3O88413 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tulp3O88413 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tulp3O88413 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Tulp3O88413 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tulp3O88413 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tulp3O88413 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Tulp3O88413 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tulp3O88413 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tulp3O88413 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tulp3O88413 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.21■□□□□ 0.03
Tulp3O88413 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tulp3O88413 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tulp3O88413 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.21■□□□□ 0.03
Tulp3O88413 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tulp3O88413 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tulp3O88413 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.21■□□□□ 0.02
Tulp3O88413 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tulp3O88413 Prob1-201ENSMUST00000097619 3021 ntBASIC15.21■□□□□ 0.02
Tulp3O88413 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tulp3O88413 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tulp3O88413 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tulp3O88413 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Tulp3O88413 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tulp3O88413 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Tulp3O88413 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Tulp3O88413 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Gm12441-201ENSMUST00000121806 588 ntBASIC15.2■□□□□ 0.02
Tulp3O88413 Gm37856-201ENSMUST00000191634 999 ntBASIC15.2■□□□□ 0.02
Tulp3O88413 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.2■□□□□ 0.02
Tulp3O88413 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tulp3O88413 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.2■□□□□ 0.02
Tulp3O88413 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tulp3O88413 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tulp3O88413 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.19■□□□□ 0.02
Tulp3O88413 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tulp3O88413 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tulp3O88413 Actl10-202ENSMUST00000226583 1501 ntBASIC15.19■□□□□ 0.02
Tulp3O88413 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tulp3O88413 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tulp3O88413 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms